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Deep State-Space Generative Model For Correlated Time-to-Event Predictions (2407.19371v1)

Published 28 Jul 2024 in cs.LG

Abstract: Capturing the inter-dependencies among multiple types of clinically-critical events is critical not only to accurate future event prediction, but also to better treatment planning. In this work, we propose a deep latent state-space generative model to capture the interactions among different types of correlated clinical events (e.g., kidney failure, mortality) by explicitly modeling the temporal dynamics of patients' latent states. Based on these learned patient states, we further develop a new general discrete-time formulation of the hazard rate function to estimate the survival distribution of patients with significantly improved accuracy. Extensive evaluations over real EMR data show that our proposed model compares favorably to various state-of-the-art baselines. Furthermore, our method also uncovers meaningful insights about the latent correlations among mortality and different types of organ failures.

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Authors (7)
  1. Yuan Xue (59 papers)
  2. Denny Zhou (65 papers)
  3. Nan Du (66 papers)
  4. Andrew M. Dai (40 papers)
  5. Zhen Xu (76 papers)
  6. Kun Zhang (353 papers)
  7. Claire Cui (14 papers)
Citations (8)

Summary

  • The paper introduces a deep state-space model that jointly predicts multiple correlated clinical events using latent patient states.
  • It employs electronic medical records as time-series data to flexibly estimate survival distributions without restrictive parametric assumptions.
  • Experimental results show improved metrics, including higher C-index and AUC-ROC, outperforming state-of-the-art methods like DeepSurv and DRSA.

Deep State-Space Generative Model for Correlated Time-to-Event Predictions

The paper "Deep State-Space Generative Model For Correlated Time-to-Event Predictions" introduces a novel approach centered on a deep state-space generative model to analyze the temporal progression of clinical events in healthcare, particularly where multiple types of events are correlated. This research is situated at the intersection of survival analysis and state-space models, focusing on providing more accurate and comprehensive predictions in clinical settings by capturing interdependencies among various critical events (e.g., different types of organ failures and mortality).

Methodological Approach

The proposed model utilizes electronic medical records (EMR) in the form of time-series data, wherein both observations (such as vital signs and lab results) and interventions (such as medication dosages and medical procedures) are leveraged to predict future occurrences of critical events. Central to the model is the notion of latent patient states, which encapsulate the physiological status of patients over time. By doing so, the model addresses limitations in existing survival analysis methods, which often fail to account for the correlations between various types of clinical events.

The model is structured around a deep state-space framework augmented with a discrete-time hazard rate function. This design allows it to estimate survival distributions flexibly without relying on restrictive parametric assumptions, thereby improving upon the accuracy of time-to-event predictions. A key innovation here is the model's ability to jointly predict risks for multiple clinical events, discerning their temporal correlations using a latent variable approach that captures the patient’s dynamic physiological state.

Experimental Evaluation and Results

The model's efficacy was validated through extensive evaluations on real EMR datasets. Comparisons were made against state-of-the-art methods, namely DeepSurv—a Cox proportional hazards model enhanced by neural networks—and Deep Recurrent Survival Analysis (DRSA). The findings consistently reveal that the proposed model yields superior predictive performance, evidenced by higher concordance indices (C-index) and improved short-term prediction metrics such as AUC-ROC and average precision (AP) within specified time frames.

These results underscore the model’s capabilities not only in predicting individual event risks but also in revealing underlying correlations between events. For instance, the model can establish significant correlations between various organ failures and mortality, thereby aligning with clinical understandings of how comorbidities influence overall patient mortality risks.

Implications and Future Directions

The implications of this work are profound, both in practical and theoretical terms. Practically, the ability to accurately forecast multiple correlated health events enhances clinicians' decision-making processes, potentially leading to better treatment planning and improved patient outcomes. It provides a composite risk assessment, offering detailed insights into patient trajectories which are crucial for managing complex cases involving comorbidities.

Theoretically, this work contributes to the broader understanding of temporal dynamics in survival analysis, pushing the envelope on how state representations and deep learning architectures can be effectively employed to model clinical prognostications. The findings open up avenues for future research to explore richer dynamic models that incorporate more complex interdependencies and external factors (e.g., genetic data, lifestyle variables).

In conclusion, this research advances the discourse on clinical predictions by integrating sophisticated modeling techniques that are both analytically robust and clinically interpretable. As AI and machine learning continue to permeate the healthcare sector, models like the one presented anchor possibilities for more personalized and accurate healthcare solutions. Future work might explore integrating these models in clinical practice, assessing their real-world impact in diverse healthcare settings.

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