Emergent Mind

FedMedICL: Towards Holistic Evaluation of Distribution Shifts in Federated Medical Imaging

(2407.08822)
Published Jul 11, 2024 in eess.IV , cs.AI , and cs.CV

Abstract

For medical imaging AI models to be clinically impactful, they must generalize. However, this goal is hindered by (i) diverse types of distribution shifts, such as temporal, demographic, and label shifts, and (ii) limited diversity in datasets that are siloed within single medical institutions. While these limitations have spurred interest in federated learning, current evaluation benchmarks fail to evaluate different shifts simultaneously. However, in real healthcare settings, multiple types of shifts co-exist, yet their impact on medical imaging performance remains unstudied. In response, we introduce FedMedICL, a unified framework and benchmark to holistically evaluate federated medical imaging challenges, simultaneously capturing label, demographic, and temporal distribution shifts. We comprehensively evaluate several popular methods on six diverse medical imaging datasets (totaling 550 GPU hours). Furthermore, we use FedMedICL to simulate COVID-19 propagation across hospitals and evaluate whether methods can adapt to pandemic changes in disease prevalence. We find that a simple batch balancing technique surpasses advanced methods in average performance across FedMedICL experiments. This finding questions the applicability of results from previous, narrow benchmarks in real-world medical settings.

LTR accuracy on a hold-out test set across new demographic distributions.

Overview

  • The FedMedICL framework addresses limitations in medical imaging AI models by evaluating their generalization capabilities under various distribution shifts, including temporal, demographic, and label-based shifts.

  • FedMedICL introduces a holistic benchmarking methodology that simulates federated learning conditions using multiple medical datasets from different institutions, reflecting real-world demographic and temporal variations.

  • Experimental results highlight the superiority of simple class-balancing methods over more complex techniques, suggesting a need for re-evaluating existing benchmarks and developing new strategies to enhance AI model adaptability in clinical environments.

FedMedICL: Towards Holistic Evaluation of Distribution Shifts in Federated Medical Imaging

The paper "FedMedICL: Towards Holistic Evaluation of Distribution Shifts in Federated Medical Imaging" presents a novel framework aimed at addressing critical limitations in the performance of medical imaging AI models pertaining to their generalization capabilities. The focus is particularly on the effects of distinct distribution shifts—temporal, demographic, and label-based—on the robustness and adaptability of these models when deployed in real-world clinical settings.

Introduction

Medical imaging AI models face considerable challenges in clinical deployment due to their reliance on limited, often non-representative datasets, typically confined within individual medical institutions. These datasets exhibit diverse types of distribution shifts, undermining the generalization capacity of the models across different patient populations and temporal conditions. The proposed framework, FedMedICL, aims to holistically evaluate these federated medical imaging challenges by simultaneously considering label, demographic, and temporal distribution shifts.

Benchmark Construction Methodology

FedMedICL is meticulously designed to reflect the multifaceted nature of real-world medical environments. The framework simulates federated learning conditions across several medical datasets, each representing distinct institutions with unique demographic traits and temporal changes. By incorporating three types of shifts—label imbalance, demographic variability, and temporal evolution—FedMedICL models a more realistic and challenging scenario for AI models.

FedMedICL introduces two key components for benchmark construction:

  1. Client Splitting: This component simulates data distribution across institutions by segregating clients into Balanced and Skewed categories, reflecting typical demographic distributions in medical settings.
  2. Temporal Task Splitting: It models the evolution of medical data over time within each institution, addressing how AI models can adapt to changes such as the emergence of new diseases or seasonal demographic shifts in patient data.

Experimental Evaluation and Results

FedMedICL evaluates several widely-used methods—augmented with federated averaging mechanisms—through comprehensive experiments on six diverse medical imaging datasets. The experiments span approximately 550 GPU hours and include:

  1. CheXpert
  2. Fitzpatrick17k
  3. HAM10000
  4. OL3I
  5. PAPILA
  6. CheXCOVID

The experiments demonstrate that a simple class-balancing (F-CB) method outperforms more sophisticated techniques across most datasets. The results emphasize the inadequacy of previous benchmarks that evaluated these techniques in isolation, failing to represent the compounded challenges faced in real-world medical environments with multiple overlapping shifts. For instance, advanced algorithms like F-SWAD and F-CRT fall short in comparison to the simple F-CB method, questioning the robustness and adaptability of these approaches.

Adaptation to Pandemic Conditions

The study further explores the adaptability of AI models under pandemic conditions using the novel CheXCOVID dataset. This experiment simulates the varying rates of COVID-19 spread across multiple institutions, testing the models' ability to recognize the novel disease while maintaining performance on pre-existing conditions. The findings reveal a crucial balance between plasticity and stability, with no current method striking an optimal trade-off. This scenario underscores the need for new strategies capable of both swift adaptation to emerging diseases and retention of performance on established conditions.

Discussion and Implications

The implications of this research are twofold—practical and theoretical. Practically, FedMedICL provides a comprehensive benchmark that better reflects the complexities of real-world medical data. This can drive the development of more robust AI models adaptable to diverse clinical scenarios. Theoretically, the framework challenges the existing evaluation paradigms in federated learning and medical imaging, pushing for a reconsideration of how performance metrics should be defined and assessed.

Future Directions

Future research inspired by FedMedICL may encompass:

  1. Extension of Benchmarks: Including more diverse attributes and intersecting attributes to capture a wider range of clinical scenarios.
  2. Novel Methodologies: Development of new AI methodologies that balance plasticity and stability, particularly in dynamic and unpredictable environments such as during pandemic outbreaks.
  3. Modality Diversification: Expanding FedMedICL to support various data modalities beyond imaging, such as text or tabular data, enhancing its applicability in broader healthcare contexts.

Conclusion

FedMedICL sets a new standard for evaluating federated learning in medical imaging by addressing the intertwined challenges of distribution shifts and data silos. The framework's findings challenge the efficacy of previously lauded advanced methods, highlighting the need for simple yet effective solutions like class-balancing to ensure robust model performance in real-world clinical settings. This work lays a foundation for future advancements in developing universally applicable, adaptable, and resilient AI models in healthcare.

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