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Deterministic Sparse Suffix Sorting in the Restore Model

Published 24 Sep 2015 in cs.DS | (1509.07417v2)

Abstract: Given a text TT of length nn, we propose a deterministic online algorithm computing the sparse suffix array and the sparse longest common prefix array of TT in O(clgn+mlgmlgnlg<sup></sup>n)O(c \sqrt{\lg n} + m \lg m \lg n \lg<sup>*</sup> n) time with O(m)O(m) words of space under the premise that the space of TT is rewritable, where mnm \le n is the number of suffixes to be sorted (provided online and arbitrarily), and cc is the number of characters with mcnm \le c \le n that must be compared for distinguishing the designated suffixes.

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